| ID | hsa_circ_0001771 | |||||
| Alias | hsa_circ_000976 | |||||
| Position | chr7:155457868-155473602 | |||||
| Strand | + | |||||
| Genomic length | 15734 | |||||
| Spliced sequence length | 524 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_053043 | |||||
| Gene symbol | RBM33 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | occipital_lobe | 424 | 158 | 64 | 40 | parietal_lobe | 192 | 113 | 87 | 41 | Sy5y_exp1_D2 | 5 | 4 | 10 | 10 | SY5Y_exp2_D4 | 9 | 7 | 10 | 19 | Sy5y_exp1_D0 | 7 | 6 | 18 | 22 | cerebellum | 146 | 99 | 71 | 45 | Sy5y_exp1_D4 | 8 | 6 | 9 | 13 | SY5Y_exp2_D0 | 6 | 6 | 16 | 14 | SY5Y_exp2_D8 | 3 | 3 | 12 | 17 | frontal_cortex | 923 | 208 | 54 | 56 | diencephalon | 130 | 88 | 42 | 36 | temporal_lobe | 393 | 136 | 44 | 22 |
| Salzman2013 | Nhek | Ag04450 | 9 | 5 | 8 | 4 | Bj | 8 | 4 | 7 | 4 | K562 | 56 | 41 | 23 | 33 | Helas3 | 1 | 1 | 8 | 1 | Huvec | 2 | 1 | 8 | 1 | Sknshra | 20 | 8 | 21 | 4 | A549 | 2 | 2 | 7 | 3 | Gm12878 | 2 | 2 | 4 | 2 |
| Maass2017 | adipose | 2 | 2 | 6 | 2 | vena_cava | 3 | 3 | 0 | 5 | platelets | 13 | 10 | 0 | 0 | WAS2 | 4 | 4 | 15 | 14 | chondrocytes | 3 | 3 | 2 | 0 |
| Memczak2013 | cd_19 | 3 | 2 | 11 | 8 | |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||