| ID | hsa_circ_0001742 | |||||
| Alias | hsa_circ_000011 | |||||
| Position | chr7:128845043-128846428 | |||||
| Strand | + | |||||
| Genomic length | 1385 | |||||
| Spliced sequence length | 727 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_005631 | |||||
| Gene symbol | SMO | |||||
| Experimental exidence | ||||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | frontal_cortex | 174 | 65 | 16 | 17 | cerebellum | 113 | 75 | 40 | 55 | occipital_lobe | 100 | 59 | 26 | 20 | SY5Y_exp2_D8 | 2 | 2 | 3 | 16 | SY5Y_exp2_D4 | 6 | 5 | 7 | 18 | Sy5y_exp1_D4 | 4 | 4 | 12 | 20 | Sy5y_exp1_D2 | 11 | 11 | 22 | 26 | temporal_lobe | 44 | 30 | 6 | 17 | diencephalon | 66 | 53 | 18 | 26 | Sy5y_exp1_D0 | 5 | 5 | 22 | 30 | parietal_lobe | 72 | 41 | 21 | 38 |
| Maass2017 | ada_scid | 2 | 2 | 0 | 2 | |
| Memczak2013 | HEK293 | 2 | 2 | 1 | 3 | |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||