| ID | hsa_circ_0001687 | |||||
| Alias | hsa_circ_001323 | |||||
| Position | chr7:24663284-24720139 | |||||
| Strand | + | |||||
| Genomic length | 56855 | |||||
| Spliced sequence length | 1448 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_016447 | |||||
| Gene symbol | MPP6 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Huvec | 7 | 2 | 5 | 8 | A549 | 28 | 11 | 4 | 24 | H1hesc | 12 | 4 | 12 | 39 | K562 | 23 | 18 | 29 | 71 | Gm12878 | 16 | 10 | 22 | 27 | Sknshra | 26 | 12 | 10 | 8 | Helas3 | 13 | 6 | 13 | 26 | Bj | 16 | 7 | 6 | 5 | Hepg2 | 17 | 5 | 8 | 20 | Ag04450 | 20 | 11 | 9 | 17 |
| Memczak2013 | cd_19 | 4 | 4 | 0 | 3 | HEK293 | 1 | 1 | 0 | 0 |
| Maass2017 | platelets | 2 | 2 | 0 | 0 | |
| Rybak2015 | parietal_lobe | 65 | 44 | 180 | 107 | cerebellum | 41 | 32 | 97 | 81 | Sy5y_exp1_D2 | 2 | 2 | 12 | 5 | Sy5y_exp1_D0 | 3 | 3 | 9 | 9 | Sy5y_exp1_D4 | 2 | 2 | 5 | 5 | frontal_cortex | 149 | 78 | 246 | 95 | SY5Y_exp2_D8 | 2 | 2 | 0 | 3 | SY5Y_exp2_D0 | 2 | 2 | 3 | 8 | SY5Y_exp2_D4 | 6 | 6 | 9 | 2 | temporal_lobe | 72 | 34 | 147 | 85 | diencephalon | 62 | 48 | 137 | 76 | occipital_lobe | 207 | 96 | 352 | 126 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||