| ID | hsa_circ_0001686 | |||||
| Alias | hsa_circ_001604 | |||||
| Position | chr7:24663284-24708279 | |||||
| Strand | + | |||||
| Genomic length | 44995 | |||||
| Spliced sequence length | 1116 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_016447 | |||||
| Gene symbol | MPP6 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | cerebellum | 168 | 109 | 97 | 97 | SY5Y_exp2_D4 | 18 | 13 | 9 | 17 | diencephalon | 292 | 153 | 137 | 140 | Sy5y_exp1_D0 | 26 | 17 | 9 | 21 | SY5Y_exp2_D8 | 8 | 5 | 0 | 11 | occipital_lobe | 833 | 225 | 352 | 191 | SY5Y_exp2_D0 | 14 | 9 | 3 | 23 | temporal_lobe | 318 | 121 | 147 | 120 | Sy5y_exp1_D2 | 10 | 10 | 12 | 14 | frontal_cortex | 696 | 177 | 246 | 162 | Sy5y_exp1_D4 | 8 | 8 | 5 | 10 | parietal_lobe | 218 | 105 | 180 | 143 |
| Maass2017 | WAS2 | 5 | 4 | 2 | 2 | HUAEC | 2 | 2 | 0 | 2 | LCL | 3 | 3 | 0 | 5 | platelets | 6 | 4 | 0 | 0 | cortex | 2 | 2 | 4 | 9 |
| Salzman2013 | Helas3 | 3 | 3 | 13 | 0 | Hepg2 | 5 | 4 | 8 | 2 | A549 | 8 | 6 | 4 | 3 | Sknshra | 13 | 7 | 10 | 4 | Gm12878 | 43 | 24 | 22 | 8 | Bj | 7 | 6 | 6 | 2 | K562 | 131 | 78 | 29 | 81 | Huvec | 2 | 1 | 5 | 0 | Hsmm | 1 | 1 | 0 | 0 | Nhek | 5 | 2 | 4 | 4 | H1hesc | 51 | 23 | 12 | 9 | Ag04450 | 13 | 11 | 9 | 14 |
| Memczak2013 | HEK293 | 3 | 2 | 0 | 3 | cd_19 | 5 | 3 | 0 | 5 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||