| ID | hsa_circ_0001681 | |||||
| Alias | hsa_circ_001603 | |||||
| Position | chr7:22330793-22357656 | |||||
| Strand | - | |||||
| Genomic length | 26863 | |||||
| Spliced sequence length | 516 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_012294 | |||||
| Gene symbol | RAPGEF5 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | cd_19 | 7 | 2 | 6 | 14 | HEK293 | 1 | 1 | 0 | 3 |
| Rybak2015 | parietal_lobe | 187 | 49 | 17 | 11 | cerebellum | 28 | 19 | 2 | 4 | SY5Y_exp2_D4 | 2 | 2 | 0 | 2 | Sy5y_exp1_D2 | 5 | 4 | 2 | 4 | Sy5y_exp1_D0 | 10 | 8 | 2 | 10 | occipital_lobe | 346 | 48 | 8 | 15 | Sy5y_exp1_D4 | 6 | 3 | 2 | 5 | diencephalon | 194 | 62 | 5 | 8 | frontal_cortex | 1077 | 111 | 21 | 24 | temporal_lobe | 477 | 63 | 5 | 5 |
| Maass2017 | cortex | 3 | 3 | 0 | 4 | |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||