| ID | hsa_circ_0001680 | |||||
| Alias | hsa_circ_000978 | |||||
| Position | chr7:18624903-18633652 | |||||
| Strand | + | |||||
| Genomic length | 8749 | |||||
| Spliced sequence length | 642 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001204146 | |||||
| Gene symbol | HDAC9 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | occipital_lobe | 67 | 31 | 173 | 152 | frontal_cortex | 107 | 52 | 154 | 190 | diencephalon | 25 | 20 | 85 | 100 | parietal_lobe | 33 | 27 | 153 | 165 | cerebellum | 3 | 3 | 77 | 56 | temporal_lobe | 70 | 34 | 87 | 140 | Sy5y_exp1_D2 | 2 | 2 | 13 | 24 | Sy5y_exp1_D0 | 8 | 8 | 42 | 79 |
| Maass2017 | platelets | 4 | 4 | 2 | 0 | |
| Jeck2013 | Hs68_control | 4 | 3 | 36 | 42 | Hs68_RNase | 42 | 28 | 12 | 27 |
| Memczak2013 | cd_19 | 3 | 2 | 29 | 0 | |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||