| ID | hsa_circ_0001666 | |||||
| Alias | hsa_circ_000742 | |||||
| Position | chr6:170626457-170639638 | |||||
| Strand | + | |||||
| Genomic length | 13181 | |||||
| Spliced sequence length | 2038 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_032448 | |||||
| Gene symbol | FAM120B | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | diencephalon | 61 | 48 | 38 | 72 | cerebellum | 28 | 25 | 40 | 51 | temporal_lobe | 8 | 7 | 16 | 38 | Sy5y_exp1_D0 | 4 | 4 | 10 | 8 | parietal_lobe | 27 | 24 | 32 | 54 | SY5Y_exp2_D0 | 2 | 2 | 10 | 16 | SY5Y_exp2_D4 | 3 | 3 | 13 | 10 | occipital_lobe | 54 | 36 | 28 | 65 | frontal_cortex | 96 | 46 | 45 | 75 | Sy5y_exp1_D4 | 2 | 2 | 9 | 7 |
| Memczak2013 | HEK293 | 2 | 2 | 2 | 2 | |
| Salzman2013 | K562 | 11 | 8 | 27 | 40 | Huvec | 4 | 2 | 35 | 19 | A549 | 24 | 16 | 9 | 19 | Gm12878 | 7 | 3 | 15 | 28 | Nhek | 10 | 4 | 24 | 38 | Ag04450 | 14 | 11 | 43 | 25 | Helas3 | 16 | 8 | 10 | 22 | Sknshra | 12 | 8 | 66 | 50 | Hsmm | Hepg2 | 7 | 3 | 24 | 27 | Bj | 14 | 7 | 21 | 15 | H1hesc | 14 | 5 | 17 | 25 | Mcf7 | 43 | 6 | 4 | 14 | Nhlf | 18 | 3 | 0 | 5 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||