| ID | hsa_circ_0001663 | |||||
| Alias | hsa_circ_001317 | |||||
| Position | chr6:159004985-159010814 | |||||
| Strand | + | |||||
| Genomic length | 5829 | |||||
| Spliced sequence length | 324 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_020823 | |||||
| Gene symbol | TMEM181 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_control | 9 | 6 | 29 | 71 | Hs68_RNase | 130 | 64 | 70 | 39 |
| Rybak2015 | Sy5y_exp1_D2 | 11 | 10 | 24 | 39 | temporal_lobe | 409 | 115 | 78 | 69 | Sy5y_exp1_D0 | 7 | 7 | 13 | 25 | diencephalon | 251 | 137 | 128 | 162 | Sy5y_exp1_D4 | 10 | 7 | 25 | 32 | occipital_lobe | 494 | 161 | 143 | 130 | parietal_lobe | 325 | 134 | 106 | 111 | cerebellum | 210 | 134 | 91 | 137 | SY5Y_exp2_D8 | 2 | 2 | 11 | 20 | frontal_cortex | 1168 | 219 | 157 | 133 | SY5Y_exp2_D0 | 2 | 2 | 13 | 20 |
| Maass2017 | WAS2 | 5 | 4 | 6 | 3 | platelets | 2 | 2 | 6 | 0 | LCL | 2 | 2 | 0 | 2 |
| Memczak2013 | neutr | 4 | 1 | 0 | 1 | HEK293 | 1 | 1 | 5 | 7 |
| Salzman2013 | A549 | 29 | 17 | 11 | 37 | Nhek | 74 | 22 | 34 | 124 | Huvec | 30 | 7 | 17 | 62 | H1hesc | 128 | 37 | 24 | 97 | Mcf7 | 3 | 1 | 0 | 29 | Sknshra | 37 | 21 | 23 | 96 | K562 | 350 | 187 | 150 | 209 | Helas3 | 45 | 27 | 47 | 123 | Gm12878 | 77 | 38 | 28 | 35 | Ag04450 | 102 | 51 | 34 | 78 | Bj | 34 | 16 | 11 | 39 | Nhlf | Hepg2 | 79 | 20 | 47 | 99 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||