| ID | hsa_circ_0001577 | |||||
| Alias | hsa_circ_001598 | |||||
| Position | chr6:13632601-13644961 | |||||
| Strand | - | |||||
| Genomic length | 12360 | |||||
| Spliced sequence length | 1020 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_005493 | |||||
| Gene symbol | RANBP9 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | Sy5y_exp1_D0 | 5 | 5 | 6 | 24 | frontal_cortex | 343 | 118 | 32 | 84 | parietal_lobe | 126 | 85 | 13 | 76 | diencephalon | 107 | 77 | 16 | 106 | Sy5y_exp1_D4 | 4 | 4 | 5 | 31 | cerebellum | 74 | 56 | 12 | 75 | SY5Y_exp2_D0 | 4 | 4 | 2 | 13 | SY5Y_exp2_D4 | 6 | 5 | 0 | 18 | occipital_lobe | 306 | 119 | 15 | 46 | SY5Y_exp2_D8 | 2 | 2 | 2 | 13 | temporal_lobe | 239 | 68 | 13 | 46 |
| Maass2017 | adipose | 3 | 3 | 0 | 8 | neutophils | 7 | 6 | 0 | 0 | cortex | 5 | 4 | 0 | 7 | platelets | 17 | 15 | 0 | 4 |
| Memczak2013 | neutr | 4 | 2 | 1 | 4 | HEK293 | 4 | 4 | 0 | 3 | cd_19 | 3 | 3 | 0 | 5 |
| Salzman2013 | Bj | 5 | 3 | 10 | 28 | H1hesc | 4 | 2 | 24 | 20 | Sknshra | 10 | 4 | 8 | 31 | K562 | 99 | 60 | 69 | 169 | Hepg2 | 3 | 1 | 10 | 16 | Nhek | 15 | 4 | 13 | 15 | A549 | 1 | 1 | 1 | 16 | Ag04450 | 7 | 5 | 10 | 50 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||