| ID | hsa_circ_0001573 | |||||
| Alias | hsa_circ_001179 | |||||
| Position | chr6:7176887-7189555 | |||||
| Strand | + | |||||
| Genomic length | 12668 | |||||
| Spliced sequence length | 709 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001168344 | |||||
| Gene symbol | RREB1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_control | 38 | 27 | 20 | 10 | Hs68_RNase | 473 | 153 | 14 | 8 |
| Memczak2013 | neutr | 4 | 2 | 7 | 4 | |
| Rybak2015 | occipital_lobe | 14 | 10 | 3 | 0 | cerebellum | 15 | 14 | 19 | 14 | parietal_lobe | 3 | 3 | 17 | 9 | diencephalon | 14 | 12 | 6 | 10 |
| Maass2017 | ada_scid | 3 | 3 | 7 | 2 | vena_cava | 5 | 5 | 3 | 4 | WAS2 | 7 | 7 | 5 | 4 |
| Salzman2013 | Gm12878 | 274 | 109 | 80 | 56 | Hsmm | 81 | 6 | 41 | 46 | Ag04450 | 187 | 66 | 33 | 57 | Hepg2 | 470 | 101 | 45 | 94 | Bj | 195 | 61 | 42 | 45 | K562 | 163 | 102 | 118 | 101 | Nhek | 110 | 28 | 96 | 122 | Nhlf | 14 | 4 | 10 | 18 | A549 | 194 | 60 | 36 | 59 | H1hesc | 96 | 29 | 66 | 57 | Sknshra | 63 | 23 | 35 | 45 | Huvec | 30 | 8 | 27 | 67 | Helas3 | 365 | 105 | 60 | 115 | Mcf7 | 136 | 11 | 46 | 80 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples)![]() | |||||
