circBase

ID	hsa_circ_0001538
Alias	hsa_circ_001707
Position	chr5:138699447-138700432
Strand	+
Genomic length	985
Spliced sequence length	344
Annotation	ANNOTATED CDS coding INTERNAL UTR5
Repeats	None
Best transcript	NM_001033112
Gene symbol	PAIP2
Scores	circRNA study	Sample	total reads circular junction	unique reads circular junction	unique reads linear-5' junctions	unique reads linear-3' junctions
	Salzman2013	Sknshra	35	18	48	43
		A549	17	10	46	32
		Huvec	9	3	23	19
		Helas3	13	6	51	17
		Nhek	16	6	24	20
		H1hesc	29	15	53	47
		Hepg2	5	3	51	35
		K562	81	60	136	166
		Ag04450	62	33	53	52
		Bj	46	18	61	37
		Gm12878	34	15	32	47
	Rybak2015	Sy5y_exp1_D2	6	6	46	77
		cerebellum	176	114	89	148
		parietal_lobe	227	109	84	109
		SY5Y_exp2_D8	3	3	16	42
		frontal_cortex	803	209	85	147
		Sy5y_exp1_D4	6	6	52	76
		SY5Y_exp2_D4	3	3	27	48
		Sy5y_exp1_D0	3	3	49	82
		temporal_lobe	380	105	65	101
		occipital_lobe	418	153	77	133
		diencephalon	203	116	114	161
	Memczak2013	cd_19	10	4	58	97
	Maass2017	platelets	13	11	40	55
		adipose	2	2	28	34
		vena_cava	2	2	15	24
Aligned reads	Memczak 2013 circRNA study (pooled samples)