| ID | hsa_circ_0001531 | |||||
| Alias | hsa_circ_000719 | |||||
| Position | chr5:132426884-132428481 | |||||
| Strand | + | |||||
| Genomic length | 1597 | |||||
| Spliced sequence length | 272 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_002154 | |||||
| Gene symbol | HSPA4 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | neutr | 2 | 2 | 2 | 3 | |
| Rybak2015 | diencephalon | 34 | 24 | 219 | 249 | Sy5y_exp1_D0 | 3 | 3 | 62 | 71 | frontal_cortex | 91 | 43 | 141 | 193 | temporal_lobe | 61 | 27 | 101 | 140 | cerebellum | 27 | 25 | 184 | 175 | occipital_lobe | 37 | 25 | 149 | 153 | parietal_lobe | 32 | 29 | 138 | 167 | SY5Y_exp2_D4 | 2 | 2 | 29 | 44 | SY5Y_exp2_D0 | 2 | 2 | 38 | 54 |
| Jeck2013 | Hs68_control | 4 | 4 | 103 | 89 | Hs68_RNase | 98 | 65 | 7 | 4 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||