| ID | hsa_circ_0001508 | |||||
| Alias | hsa_circ_001529 | |||||
| Position | chr5:80071512-80088663 | |||||
| Strand | + | |||||
| Genomic length | 17151 | |||||
| Spliced sequence length | 402 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_002439 | |||||
| Gene symbol | MSH3 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_control | Hs68_RNase | 56 | 38 | 11 | 10 |
| Maass2017 | LCL | 2 | 2 | 3 | 2 | ada_scid | 2 | 2 | 0 | 4 | WAS2 | 2 | 2 | 4 | 3 | platelets | 2 | 2 | 0 | 0 |
| Rybak2015 | occipital_lobe | 131 | 58 | 67 | 97 | temporal_lobe | 37 | 18 | 21 | 63 | frontal_cortex | 172 | 65 | 58 | 89 | diencephalon | 105 | 59 | 54 | 120 | parietal_lobe | 60 | 48 | 35 | 73 | Sy5y_exp1_D0 | 6 | 5 | 7 | 16 | cerebellum | 48 | 37 | 46 | 88 | Sy5y_exp1_D4 | 2 | 2 | 8 | 17 | SY5Y_exp2_D0 | 2 | 2 | 2 | 14 |
| Memczak2013 | cd_19 | 7 | 2 | 0 | 6 | |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||