| ID | hsa_circ_0001498 | |||||
| Alias | hsa_circ_001775 | |||||
| Position | chr5:76758919-76760634 | |||||
| Strand | - | |||||
| Genomic length | 1715 | |||||
| Spliced sequence length | 181 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_018268 | |||||
| Gene symbol | WDR41 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | Sy5y_exp1_D0 | 8 | 4 | 16 | 21 | temporal_lobe | 84 | 31 | 21 | 60 | cerebellum | 31 | 25 | 61 | 119 | Sy5y_exp1_D4 | 3 | 3 | 12 | 22 | SY5Y_exp2_D4 | 7 | 4 | 9 | 11 | frontal_cortex | 84 | 36 | 45 | 127 | occipital_lobe | 45 | 27 | 40 | 150 | Sy5y_exp1_D2 | 7 | 7 | 15 | 22 | diencephalon | 47 | 28 | 60 | 128 | parietal_lobe | 43 | 27 | 42 | 92 | SY5Y_exp2_D0 | 3 | 3 | 12 | 14 |
| Maass2017 | umbilical_cord | 3 | 3 | 0 | 0 | WAS2 | 2 | 2 | 10 | 12 | VSMC | 3 | 3 | 6 | 8 | muscle | 3 | 3 | 2 | 0 | neutophils | 6 | 6 | 0 | 0 | fibroblasts | 2 | 2 | 0 | 4 | vena_cava | 9 | 6 | 3 | 7 | platelets | 31 | 13 | 0 | 2 | ada_scid | 5 | 3 | 2 | 5 | decidua | 2 | 2 | 6 | 3 | right_atrium | 4 | 3 | 4 | 0 |
| Salzman2013 | Ag04450 | 10 | 8 | 27 | 58 | Helas3 | 3 | 3 | 12 | 19 | K562 | 2 | 2 | 88 | 136 | Sknshra | 16 | 10 | 14 | 39 | A549 | 1 | 1 | 27 | 34 | Bj | 10 | 5 | 29 | 50 |
| Jeck2013 | Hs68_control | 2 | 2 | 43 | 59 | Hs68_RNase | 52 | 23 | 16 | 45 |
| Memczak2013 | cd_19 | 12 | 4 | 1 | 9 | |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||