| ID | hsa_circ_0001493 | |||||
| Alias | hsa_circ_001427 | |||||
| Position | chr5:65284462-65310553 | |||||
| Strand | + | |||||
| Genomic length | 26091 | |||||
| Spliced sequence length | 590 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001253697 | |||||
| Gene symbol | ERBB2IP | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | occipital_lobe | 37 | 20 | 39 | 32 | parietal_lobe | 13 | 10 | 51 | 31 | temporal_lobe | 18 | 9 | 24 | 10 | SY5Y_exp2_D8 | 2 | 2 | 8 | 11 | cerebellum | 26 | 17 | 65 | 48 | diencephalon | 9 | 7 | 53 | 47 | frontal_cortex | 59 | 21 | 33 | 40 |
| Jeck2013 | Hs68_RNase | 66 | 21 | 4 | 0 | Hs68_control | 7 | 5 | 42 | 32 |
| Salzman2013 | Huvec | 2 | 1 | 21 | 12 | K562 | 1 | 1 | 168 | 97 | Ag04450 | 9 | 8 | 93 | 61 | Helas3 | 1 | 1 | 18 | 11 | Gm12878 | 9 | 7 | 63 | 29 |
| Memczak2013 | cd_19 | 6 | 3 | 14 | 14 | |
| Maass2017 | platelets | 8 | 4 | 15 | 12 | WAS2 | 2 | 2 | 15 | 12 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||