| ID | hsa_circ_0001470 | |||||
| Alias | hsa_circ_000725 | |||||
| Position | chr5:32135677-32143986 | |||||
| Strand | - | |||||
| Genomic length | 8309 | |||||
| Spliced sequence length | 247 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_022130 | |||||
| Gene symbol | GOLPH3 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | Sy5y_exp1_D4 | 5 | 5 | 23 | 32 | Sy5y_exp1_D0 | 11 | 7 | 28 | 39 | parietal_lobe | 42 | 39 | 50 | 105 | cerebellum | 38 | 28 | 68 | 129 | diencephalon | 33 | 30 | 66 | 142 | temporal_lobe | 60 | 33 | 51 | 94 | occipital_lobe | 78 | 46 | 70 | 116 | Sy5y_exp1_D2 | 7 | 7 | 17 | 35 | SY5Y_exp2_D0 | 3 | 3 | 15 | 29 | frontal_cortex | 100 | 57 | 73 | 144 |
| Memczak2013 | HEK293 | 2 | 2 | 3 | 8 | |
| Maass2017 | cortex | 2 | 2 | 2 | 8 | WAS2 | 5 | 4 | 14 | 21 | platelets | 7 | 7 | 2 | 2 | MSC_047 | 3 | 2 | 16 | 26 | umbilical_cord | 2 | 2 | 0 | 9 | VSMC | 2 | 2 | 10 | 15 | neutophils | 4 | 4 | 4 | 6 | MSC | 2 | 2 | 5 | 11 | decidua | 5 | 5 | 7 | 13 | right_atrium | 2 | 2 | 9 | 6 | adipose | 4 | 4 | 11 | 20 | HUAEC | 5 | 4 | 13 | 19 | muscle | 4 | 3 | 2 | 5 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||