| ID | hsa_circ_0001421 | |||||
| Alias | hsa_circ_001303 | |||||
| Position | chr4:83799882-83803090 | |||||
| Strand | - | |||||
| Genomic length | 3208 | |||||
| Spliced sequence length | 403 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_014933 | |||||
| Gene symbol | SEC31A | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | WAS2 | 2 | 2 | 7 | 23 | |
| Memczak2013 | cd_19 | 5 | 2 | 2 | 2 | |
| Rybak2015 | cerebellum | 40 | 32 | 74 | 163 | frontal_cortex | 94 | 53 | 64 | 153 | occipital_lobe | 44 | 28 | 33 | 146 | diencephalon | 23 | 18 | 47 | 155 | Sy5y_exp1_D0 | 3 | 3 | 7 | 52 | temporal_lobe | 56 | 30 | 42 | 98 | parietal_lobe | 40 | 31 | 62 | 137 |
| Jeck2013 | Hs68_RNase | 89 | 55 | 6 | 63 | Hs68_control | 4 | 3 | 50 | 135 |
| Salzman2013 | Hepg2 | 2 | 1 | 25 | 37 | Sknshra | 8 | 4 | 28 | 85 | Ag04450 | 7 | 7 | 49 | 105 | K562 | 23 | 17 | 135 | 135 | Helas3 | 14 | 8 | 31 | 50 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||