| ID | hsa_circ_0001417 | |||||
| Alias | hsa_circ_001160 | |||||
| Position | chr4:73950965-73958017 | |||||
| Strand | - | |||||
| Genomic length | 7052 | |||||
| Spliced sequence length | 1832 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_198889 | |||||
| Gene symbol | ANKRD17 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | Sy5y_exp1_D0 | 2 | 2 | 0 | 13 | parietal_lobe | 20 | 20 | 0 | 105 | temporal_lobe | 22 | 13 | 0 | 52 | occipital_lobe | 35 | 20 | 0 | 96 | SY5Y_exp2_D4 | 5 | 4 | 0 | 13 | Sy5y_exp1_D2 | 4 | 4 | 0 | 20 | frontal_cortex | 27 | 10 | 0 | 99 | SY5Y_exp2_D0 | 5 | 4 | 0 | 21 | diencephalon | 30 | 24 | 3 | 106 | cerebellum | 29 | 22 | 0 | 89 | SY5Y_exp2_D8 | 4 | 4 | 0 | 15 |
| Memczak2013 | cd_19 | 4 | 3 | 0 | 1 | |
| Maass2017 | chondrocytes | 3 | 3 | 0 | 2 | platelets | 6 | 5 | 0 | 0 |
| Salzman2013 | K562 | 10 | 9 | 0 | 203 | Bj | 2 | 1 | 0 | 63 | Helas3 | 8 | 5 | 0 | 119 | Ag04450 | 2 | 2 | 0 | 92 | Huvec | 2 | 1 | 0 | 92 | Nhek | 2 | 1 | 0 | 116 | A549 | 10 | 7 | 0 | 61 | Gm12878 | 15 | 11 | 0 | 95 | Hepg2 | 15 | 5 | 0 | 121 | H1hesc | 1 | 1 | 0 | 188 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||