| ID | hsa_circ_0001410 | |||||
| Alias | hsa_circ_000947 | |||||
| Position | chr4:52729602-52744020 | |||||
| Strand | + | |||||
| Genomic length | 14418 | |||||
| Spliced sequence length | 318 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_015115 | |||||
| Gene symbol | DCUN1D4 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 144 | 72 | 25 | 58 | Hs68_control | 6 | 5 | 50 | 81 |
| Memczak2013 | HEK293 | 1 | 1 | 4 | 6 | cd_19 | 2 | 2 | 13 | 4 |
| Rybak2015 | parietal_lobe | 181 | 96 | 100 | 159 | temporal_lobe | 315 | 88 | 54 | 149 | frontal_cortex | 731 | 166 | 150 | 233 | Sy5y_exp1_D0 | 12 | 12 | 12 | 24 | diencephalon | 169 | 97 | 153 | 182 | cerebellum | 114 | 79 | 99 | 159 | occipital_lobe | 345 | 119 | 135 | 210 | Sy5y_exp1_D2 | 10 | 8 | 9 | 24 | SY5Y_exp2_D0 | 3 | 3 | 14 | 18 | SY5Y_exp2_D8 | 3 | 3 | 6 | 19 |
| Salzman2013 | Helas3 | 21 | 14 | 34 | 13 | A549 | 33 | 19 | 23 | 21 | Sknshra | 22 | 13 | 19 | 31 | H1hesc | 3 | 3 | 41 | 13 | Ag04450 | 18 | 16 | 32 | 52 | Hepg2 | 41 | 14 | 32 | 7 | K562 | 73 | 52 | 104 | 90 | Bj | 11 | 7 | 33 | 22 | Huvec | 2 | 1 | 21 | 10 | Nhek | 11 | 8 | 59 | 16 | Gm12878 | 10 | 8 | 29 | 15 |
| Maass2017 | ada_scid | 2 | 2 | 5 | 6 | platelets | 5 | 4 | 0 | 12 | adipose | 2 | 2 | 10 | 6 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||