| ID | hsa_circ_0001398 | |||||
| Alias | hsa_circ_000946 | |||||
| Position | chr4:25334804-25335610 | |||||
| Strand | + | |||||
| Genomic length | 806 | |||||
| Spliced sequence length | 357 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_024936 | |||||
| Gene symbol | ZCCHC4 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 98 | 64 | 6 | 1 | Hs68_control | 4 | 4 | 32 | 18 |
| Salzman2013 | Hepg2 | K562 | 38 | 27 | 79 | 38 | Bj | Sknshra | 13 | 8 | 21 | 7 | Nhek | 7 | 4 | 12 | 5 | Gm12878 | 14 | 9 | 38 | 7 | Ag04450 | 17 | 11 | 18 | 6 |
| Memczak2013 | cd_19 | 3 | 2 | 2 | 0 | |
| Rybak2015 | occipital_lobe | 77 | 40 | 33 | 28 | frontal_cortex | 123 | 60 | 29 | 34 | cerebellum | 37 | 31 | 26 | 30 | temporal_lobe | 33 | 19 | 13 | 14 | diencephalon | 19 | 15 | 13 | 15 | parietal_lobe | 26 | 23 | 32 | 16 |
| Maass2017 | vena_cava | 2 | 2 | 0 | 0 | |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||