| ID | hsa_circ_0001361 | |||||
| Alias | hsa_circ_000935 | |||||
| Position | chr3:171830241-171851336 | |||||
| Strand | + | |||||
| Genomic length | 21095 | |||||
| Spliced sequence length | 215 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_022763 | |||||
| Gene symbol | FNDC3B | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Ag04450 | 260 | 93 | 87 | 134 | Hsmm | 14 | 2 | 14 | 173 | Hepg2 | 239 | 55 | 66 | 178 | A549 | 160 | 63 | 66 | 140 | H1hesc | 70 | 22 | 20 | 98 | Mcf7 | 5 | 1 | 9 | 129 | Bj | 194 | 68 | 70 | 124 | Gm12878 | 18 | 9 | 16 | 71 | Sknshra | 58 | 24 | 69 | 105 | Huvec | 141 | 36 | 100 | 206 | Nhek | 95 | 23 | 28 | 188 | K562 | 75 | 52 | 44 | 120 | Helas3 | 221 | 75 | 100 | 236 |
| Jeck2013 | Hs68_RNase | 243 | 82 | 18 | 62 | Hs68_control | 6 | 6 | 60 | 81 |
| Rybak2015 | occipital_lobe | 15 | 7 | 18 | 32 | cerebellum | 10 | 9 | 43 | 66 | parietal_lobe | 6 | 5 | 31 | 39 | diencephalon | 20 | 17 | 35 | 53 | frontal_cortex | 8 | 5 | 22 | 32 |
| Memczak2013 | HEK293 | 1 | 1 | 0 | 0 | neutr | 2 | 1 | 5 | 5 |
| Maass2017 | HUAEC | 6 | 6 | 18 | 16 | HUVEC | 2 | 2 | 0 | 0 | chondrocytes | 3 | 3 | 10 | 6 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||