| ID | hsa_circ_0001359 | |||||
| Alias | hsa_circ_002000 | |||||
| Position | chr3:169854206-169867032 | |||||
| Strand | - | |||||
| Genomic length | 12826 | |||||
| Spliced sequence length | 505 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_024947 | |||||
| Gene symbol | PHC3 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_control | 26 | 21 | 60 | 54 | Hs68_RNase | 525 | 166 | 57 | 18 |
| Salzman2013 | Nhek | 65 | 21 | 103 | 18 | Hepg2 | 70 | 24 | 158 | 11 | Ag04450 | 63 | 39 | 99 | 21 | Gm12878 | 138 | 55 | 128 | 27 | K562 | 174 | 105 | 112 | 31 | Sknshra | 38 | 22 | 74 | 7 | H1hesc | 115 | 40 | 110 | 18 | Bj | 38 | 21 | 72 | 11 | A549 | 65 | 30 | 73 | 12 | Huvec | 16 | 5 | 97 | 11 | Helas3 | 128 | 54 | 155 | 16 |
| Rybak2015 | Sy5y_exp1_D4 | 3 | 3 | 0 | 7 | occipital_lobe | 121 | 62 | 9 | 11 | diencephalon | 159 | 97 | 47 | 25 | cerebellum | 155 | 98 | 74 | 38 | SY5Y_exp2_D8 | 3 | 3 | 0 | 8 | parietal_lobe | 59 | 42 | 19 | 17 | SY5Y_exp2_D0 | 2 | 2 | 6 | 7 | SY5Y_exp2_D4 | 7 | 7 | 10 | 5 | temporal_lobe | 61 | 31 | 3 | 3 | frontal_cortex | 125 | 60 | 3 | 7 | Sy5y_exp1_D0 | 6 | 6 | 2 | 3 | Sy5y_exp1_D2 | 8 | 8 | 2 | 5 |
| Memczak2013 | neutr | 6 | 2 | 2 | 2 | cd_19 | 16 | 9 | 25 | 5 |
| Maass2017 | adipose | 3 | 3 | 4 | 2 | WAS2 | 9 | 9 | 7 | 10 | right_atrium | 2 | 2 | 0 | 0 | platelets | 30 | 20 | 2 | 0 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||