| ID | hsa_circ_0001358 | |||||
| Alias | hsa_circ_001803 | |||||
| Position | chr3:169694733-169706147 | |||||
| Strand | + | |||||
| Genomic length | 11414 | |||||
| Spliced sequence length | 585 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_003262 | |||||
| Gene symbol | SEC62 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | platelets | 8 | 7 | 26 | 17 | decidua | 3 | 3 | 14 | 12 | WAS2 | 2 | 2 | 24 | 21 |
| Salzman2013 | Bj | 1 | 1 | 40 | 118 | H1hesc | Nhek | Hepg2 | 2 | 1 | 52 | 179 | Gm12878 | 1 | 1 | 19 | 82 | Sknshra | A549 | 3 | 2 | 43 | 102 | Ag04450 | 2 | 2 | 78 | 121 | Helas3 | Huvec | 3 | 1 | 56 | 78 |
| Rybak2015 | cerebellum | 31 | 24 | 174 | 140 | occipital_lobe | 87 | 49 | 144 | 143 | parietal_lobe | 26 | 24 | 128 | 107 | diencephalon | 29 | 25 | 218 | 207 | Sy5y_exp1_D4 | 2 | 2 | 35 | 22 | temporal_lobe | 24 | 12 | 68 | 69 | frontal_cortex | 69 | 42 | 176 | 145 |
| Memczak2013 | cd_19 | 12 | 4 | 2 | 64 | |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||