| ID | hsa_circ_0001349 | |||||
| Alias | hsa_circ_001999 | |||||
| Position | chr3:152132729-152150709 | |||||
| Strand | + | |||||
| Genomic length | 17980 | |||||
| Spliced sequence length | 375 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_207296 | |||||
| Gene symbol | MBNL1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | cd_19 | 21 | 4 | 86 | 40 | |
| Maass2017 | platelets | 2 | 2 | 25 | 53 | WAS2 | 2 | 2 | 10 | 42 |
| Salzman2013 | Hmec | 84 | 7 | 0 | 5 | A549 | 20 | 9 | 1 | 110 | Bj | 65 | 16 | 5 | 132 | Ag04450 | 25 | 13 | 1 | 133 | Huvec | 31 | 8 | 15 | 173 | Gm12878 | 29 | 14 | 9 | 158 | Mcf7 | Hepg2 | 17 | 7 | 0 | 80 | Nhlf | K562 | 13 | 12 | 22 | 464 | Helas3 | 30 | 13 | 1 | 77 | Hsmm | Sknshra | 9 | 3 | 3 | 45 | H1hesc | Nhek | 7 | 2 | 20 | 121 |
| Rybak2015 | occipital_lobe | 8 | 6 | 0 | 64 | frontal_cortex | 38 | 22 | 0 | 94 | diencephalon | 7 | 7 | 3 | 99 | parietal_lobe | 15 | 11 | 0 | 74 | cerebellum | 9 | 8 | 0 | 96 |
| Jeck2013 | Hs68_RNase | 48 | 39 | 0 | 32 | Hs68_control | 1 | 1 | 2 | 97 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||