| ID | hsa_circ_0001324 | |||||
| Alias | hsa_circ_001858 | |||||
| Position | chr3:107429298-107435696 | |||||
| Strand | + | |||||
| Genomic length | 6398 | |||||
| Spliced sequence length | 414 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_020235 | |||||
| Gene symbol | BBX | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Gm12878 | 9 | 5 | 80 | 55 | Ag04450 | 6 | 3 | 64 | 48 | K562 | 3 | 3 | 74 | 65 | A549 | Bj | 1 | 1 | 50 | 33 | Helas3 | Sknshra | 2 | 1 | 57 | 65 | Hepg2 | 8 | 3 | 82 | 25 | H1hesc | 10 | 4 | 80 | 48 |
| Memczak2013 | cd_19 | 11 | 7 | 5 | 5 | neutr | 1 | 1 | 0 | 0 |
| Maass2017 | WAS2 | 3 | 3 | 14 | 8 | adipose | 3 | 3 | 4 | 9 |
| Rybak2015 | frontal_cortex | 53 | 24 | 23 | 56 | temporal_lobe | 27 | 17 | 18 | 23 | cerebellum | 44 | 36 | 64 | 98 | diencephalon | 24 | 20 | 46 | 70 | parietal_lobe | 21 | 17 | 46 | 53 | occipital_lobe | 27 | 17 | 30 | 49 | Sy5y_exp1_D0 | 2 | 2 | 12 | 8 |
| Jeck2013 | Hs68_RNase | 48 | 33 | 8 | 57 | Hs68_control | 5 | 5 | 82 | 64 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||