| ID | hsa_circ_0001320 | |||||
| Alias | hsa_circ_001418 | |||||
| Position | chr3:71064699-71102924 | |||||
| Strand | - | |||||
| Genomic length | 38225 | |||||
| Spliced sequence length | 692 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_032682 | |||||
| Gene symbol | FOXP1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Hsmm | 3 | 2 | 3 | 14 | Nhlf | A549 | 13 | 7 | 71 | 54 | K562 | 2 | 2 | 49 | 53 | Hepg2 | 7 | 5 | 67 | 53 | Sknshra | 3 | 3 | 108 | 87 | Bj | 35 | 14 | 97 | 68 | Ag04450 | 42 | 28 | 130 | 160 | Mcf7 | 71 | 6 | 15 | 48 | Huvec | 14 | 4 | 64 | 105 | Helas3 | 17 | 9 | 80 | 67 | H1hesc | 2 | 1 | 41 | 49 |
| Memczak2013 | cd_19 | 6 | 5 | 8 | 23 | |
| Jeck2013 | Hs68_control | 1 | 1 | 27 | 40 | Hs68_RNase | 30 | 21 | 2 | 17 |
| Rybak2015 | occipital_lobe | 24 | 13 | 99 | 117 | cerebellum | 9 | 9 | 78 | 67 | diencephalon | 33 | 26 | 107 | 130 | parietal_lobe | 14 | 8 | 97 | 95 | temporal_lobe | 13 | 5 | 40 | 60 | frontal_cortex | 81 | 26 | 112 | 184 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||