| ID | hsa_circ_0001280 | |||||
| Alias | hsa_circ_001943 | |||||
| Position | chr3:33725850-33738425 | |||||
| Strand | - | |||||
| Genomic length | 12575 | |||||
| Spliced sequence length | 449 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_015097 | |||||
| Gene symbol | CLASP2 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | K562 | 36 | 28 | 321 | 179 | H1hesc | 2 | 2 | 72 | 29 | Ag04450 | 1 | 1 | 35 | 12 | Sknshra | 1 | 1 | 53 | 12 | A549 | 3 | 3 | 58 | 14 |
| Jeck2013 | Hs68_control | 5 | 4 | 18 | 30 | Hs68_RNase | 79 | 52 | 2 | 4 |
| Maass2017 | platelets | 10 | 9 | 0 | 0 | vena_cava | 2 | 2 | 0 | 2 | WAS2 | 4 | 4 | 10 | 8 |
| Rybak2015 | frontal_cortex | 49 | 27 | 38 | 17 | temporal_lobe | 23 | 12 | 30 | 7 | occipital_lobe | 19 | 11 | 27 | 18 | Sy5y_exp1_D4 | 2 | 2 | 10 | 8 | Sy5y_exp1_D0 | 3 | 3 | 11 | 22 | Sy5y_exp1_D2 | 3 | 3 | 8 | 15 | cerebellum | 28 | 23 | 53 | 54 | SY5Y_exp2_D4 | 2 | 2 | 11 | 17 | parietal_lobe | 16 | 16 | 36 | 24 | diencephalon | 18 | 14 | 44 | 31 |
| Memczak2013 | cd_19 | 3 | 1 | 13 | 14 | cd_34 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||