circBase

ID	hsa_circ_0001247
Alias	hsa_circ_001589
Position	chr22:46125304-46136418
Strand	+
Genomic length	11114
Spliced sequence length	445
Annotation	ANNOTATED CDS coding INTERNAL OVCODE OVEXON
Repeats	None
Best transcript	NM_013236
Gene symbol	ATXN10
Scores	circRNA study	Sample	total reads circular junction	unique reads circular junction	unique reads linear-5' junctions	unique reads linear-3' junctions
	Memczak2013	cd_19	6	2	3	4
	Memczak2013	HEK293	2	2	15	19
	Maass2017	osteocytes	2	2	7	8
		VSMC	2	2	9	10
		vena_cava	3	3	16	9
		WAS2	7	7	32	23
		cortex	2	2	15	14
		HUAEC	2	2	26	15
		decidua	2	2	9	9
		platelets	10	8	6	0
		LCL	3	3	20	13
	Rybak2015	SY5Y_exp2_D4	4	4	49	32
		diencephalon	246	138	286	106
		SY5Y_exp2_D8	2	2	47	36
		temporal_lobe	337	118	282	88
		Sy5y_exp1_D0	15	11	76	64
		Sy5y_exp1_D2	5	4	82	64
		parietal_lobe	266	117	225	96
		Sy5y_exp1_D4	11	11	92	47
		SY5Y_exp2_D0	2	2	63	38
		occipital_lobe	614	191	282	70
		frontal_cortex	914	220	292	88
		cerebellum	215	129	231	77
	Salzman2013	Nhek	30	7	90	35
		Bj	70	18	101	89
		H1hesc	138	41	270	71
		Helas3	42	13	64	26
		Ag04450	100	39	135	142
		Gm12878	65	28	146	61
		Hepg2	56	8	39	26
		K562	43	31	212	151
		Sknshra	41	18	97	86
		A549	107	39	88	64
	Jeck2013	Hs68_RNase	1040	204	320	44
	Jeck2013	Hs68_control	33	24	230	134
Aligned reads	Memczak 2013 circRNA study (pooled samples)