circBase

ID	hsa_circ_0001247
Alias	hsa_circ_001589
Position	chr22:46125304-46136418
Strand	+
Genomic length	11114
Spliced sequence length	445
Annotation	ANNOTATED CDS coding INTERNAL OVCODE OVEXON
Repeats	None
Best transcript	NM_013236
Gene symbol	ATXN10
Scores	circRNA study	Sample	total reads circular junction	unique reads circular junction	unique reads linear-5' junctions	unique reads linear-3' junctions
	Rybak2015	temporal_lobe	337	118	282	88
		cerebellum	215	129	231	77
		diencephalon	246	138	286	106
		SY5Y_exp2_D8	2	2	47	36
		SY5Y_exp2_D4	4	4	49	32
		Sy5y_exp1_D4	11	11	92	47
		parietal_lobe	266	117	225	96
		frontal_cortex	914	220	292	88
		SY5Y_exp2_D0	2	2	63	38
		Sy5y_exp1_D0	15	11	76	64
		Sy5y_exp1_D2	5	4	82	64
		occipital_lobe	614	191	282	70
	Jeck2013	Hs68_control	33	24	230	134
	Jeck2013	Hs68_RNase	1040	204	320	44
	Maass2017	vena_cava	3	3	16	9
		LCL	3	3	20	13
		cortex	2	2	15	14
		VSMC	2	2	9	10
		platelets	10	8	6	0
		WAS2	7	7	32	23
		osteocytes	2	2	7	8
		HUAEC	2	2	26	15
		decidua	2	2	9	9
	Memczak2013	cd_19	6	2	3	4
	Memczak2013	HEK293	2	2	15	19
	Salzman2013	H1hesc	138	41	270	71
		Helas3	42	13	64	26
		Nhek	30	7	90	35
		Gm12878	65	28	146	61
		K562	43	31	212	151
		A549	107	39	88	64
		Ag04450	100	39	135	142
		Bj	70	18	101	89
		Sknshra	41	18	97	86
		Hepg2	56	8	39	26
Aligned reads	Memczak 2013 circRNA study (pooled samples)