circBase

ID	hsa_circ_0001246
Alias	hsa_circ_000678
Position	chr22:46096161-46136418
Strand	+
Genomic length	40257
Spliced sequence length	782
Annotation	ANNOTATED CDS coding INTERNAL OVCODE OVEXON
Repeats	None
Best transcript	NM_013236
Gene symbol	ATXN10
Scores	circRNA study	Sample	total reads circular junction	unique reads circular junction	unique reads linear-5' junctions	unique reads linear-3' junctions
	Rybak2015	frontal_cortex	491	121	272	88
		Sy5y_exp1_D0	6	5	72	64
		temporal_lobe	166	57	194	88
		parietal_lobe	114	65	176	96
		Sy5y_exp1_D2	6	6	76	64
		cerebellum	65	48	159	77
		SY5Y_exp2_D4	2	2	32	32
		diencephalon	84	65	216	106
		occipital_lobe	398	131	245	70
	Jeck2013	Hs68_control	27	22	183	134
	Jeck2013	Hs68_RNase	457	141	242	44
	Salzman2013	Helas3	5	4	127	26
		Nhek	2	1	104	35
		Ag04450	28	18	181	142
		Hepg2	1	1	133	26
		Sknshra	18	12	137	86
		Gm12878	3	2	109	61
		Bj	9	9	159	89
		K562	4	2	132	151
		H1hesc	6	4	201	71
		A549	7	5	160	64
	Maass2017	vena_cava	2	2	13	9
		WAS2	2	2	27	23
		cortex	3	2	14	14
	Memczak2013	HEK293	2	2	8	19
Aligned reads	Memczak 2013 circRNA study (pooled samples)