circBase

ID	hsa_circ_0001178
Alias	hsa_circ_001637
Position	chr21:17135209-17138460
Strand	+
Genomic length	3251
Spliced sequence length	223
Annotation	ANNOTATED CDS coding INTERNAL OVCODE OVEXON
Repeats	None
Best transcript	NM_013396
Gene symbol	USP25
Scores	circRNA study	Sample	total reads circular junction	unique reads circular junction	unique reads linear-5' junctions	unique reads linear-3' junctions
	Jeck2013	Hs68_RNase	218	97	1	13
	Jeck2013	Hs68_control	15	10	3	16
	Salzman2013	Ag04450	65	34	51	62
		A549	38	18	25	30
		Hsmm	2	1	2	1
		H1hesc	82	31	80	55
		Gm12878	50	27	41	50
		K562	182	125	157	230
		Bj	18	11	11	23
		Hepg2	32	16	13	19
		Huvec	40	12	54	36
		Helas3	23	16	19	34
		Sknshra	4	4	19	23
	Rybak2015	cerebellum	114	86	58	75
		frontal_cortex	422	148	42	93
		Sy5y_exp1_D0	2	2	2	10
		Sy5y_exp1_D2	3	3	3	14
		SY5Y_exp2_D4	2	2	2	3
		temporal_lobe	112	54	12	51
		SY5Y_exp2_D0	4	4	2	14
		diencephalon	105	73	48	72
		parietal_lobe	129	80	57	97
		occipital_lobe	204	95	41	81
		Sy5y_exp1_D4	6	5	0	12
	Maass2017	WAS2	6	4	6	11
		decidua	3	3	3	11
		chondrocytes	3	3	0	6
		neutophils	9	9	0	9
		vena_cava	2	2	2	5
		EPC	2	2	0	7
		platelets	21	15	0	4
		LCL	2	2	3	3
		adipose	3	3	2	14
		HUAEC	4	4	0	9
	Memczak2013	neutr	1	1	2	4
	Memczak2013	cd_19	8	4	4	2
Aligned reads	Memczak 2013 circRNA study (pooled samples)