| ID | hsa_circ_0001118 | |||||
| Alias | hsa_circ_001285 | |||||
| Position | chr2:240929490-240946787 | |||||
| Strand | - | |||||
| Genomic length | 17297 | |||||
| Spliced sequence length | 250 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_004544 | |||||
| Gene symbol | NDUFA10 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Sknshra | 11 | 8 | 10 | 73 | K562 | 136 | 87 | 104 | 125 | Hepg2 | 6 | 3 | 2 | 97 | Gm12878 | 33 | 18 | 20 | 73 | Bj | 2 | 2 | 7 | 87 | H1hesc | 7 | 4 | 15 | 44 | Ag04450 | 13 | 8 | 15 | 73 | Helas3 | 5 | 5 | 5 | 108 | A549 | 17 | 10 | 10 | 102 |
| Memczak2013 | HEK293 | 2 | 2 | 6 | 8 | neutr | 3 | 1 | 1 | 0 |
| Jeck2013 | Hs68_RNase | 192 | 97 | 65 | 35 | Hs68_control | 6 | 6 | 59 | 100 |
| Maass2017 | adipose | 2 | 2 | 11 | 19 | platelets | 5 | 5 | 0 | 0 | WAS2 | 3 | 2 | 16 | 25 | VSMC | 2 | 2 | 3 | 2 | muscle | 2 | 2 | 3 | 4 | right_atrium | 2 | 2 | 12 | 20 |
| Rybak2015 | cerebellum | 60 | 47 | 49 | 99 | SY5Y_exp2_D4 | 3 | 3 | 9 | 16 | occipital_lobe | 91 | 36 | 49 | 63 | Sy5y_exp1_D0 | 4 | 4 | 21 | 43 | temporal_lobe | 245 | 60 | 61 | 85 | parietal_lobe | 79 | 47 | 58 | 90 | diencephalon | 78 | 47 | 56 | 110 | frontal_cortex | 223 | 58 | 61 | 97 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||