| ID | hsa_circ_0001074 | |||||
| Alias | hsa_circ_001697 | |||||
| Position | chr2:148730307-148733544 | |||||
| Strand | - | |||||
| Genomic length | 3237 | |||||
| Spliced sequence length | 242 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_002552 | |||||
| Gene symbol | ORC4 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | cd_34 | 10 | 3 | 12 | 1 | |
| Maass2017 | vena_cava | 7 | 3 | 7 | 5 | platelets | 41 | 20 | 10 | 2 | WAS2 | 5 | 4 | 14 | 9 | neutophils | 2 | 2 | 0 | 6 | muscle | 5 | 5 | 0 | 3 |
| Jeck2013 | Hs68_control | 9 | 7 | 36 | 37 | Hs68_RNase | 226 | 67 | 36 | 2 |
| Salzman2013 | Huvec | Hepg2 | 2 | 2 | 16 | 0 | Nhek | 15 | 6 | 9 | 4 | Bj | 2 | 2 | 28 | 1 | H1hesc | 19 | 13 | 31 | 16 | Sknshra | 11 | 9 | 68 | 11 | Ag04450 | 13 | 10 | 38 | 10 | A549 | 8 | 6 | 44 | 7 | Gm12878 | 24 | 18 | 40 | 6 | Helas3 | 5 | 4 | 19 | 4 | K562 | 95 | 64 | 63 | 52 | Nhlf |
| Rybak2015 | SY5Y_exp2_D0 | 2 | 2 | 9 | 13 | parietal_lobe | 60 | 45 | 125 | 63 | SY5Y_exp2_D8 | 3 | 3 | 9 | 13 | cerebellum | 68 | 47 | 100 | 105 | Sy5y_exp1_D0 | 4 | 4 | 20 | 16 | diencephalon | 34 | 31 | 137 | 128 | frontal_cortex | 170 | 69 | 196 | 104 | temporal_lobe | 30 | 19 | 151 | 18 | Sy5y_exp1_D4 | 7 | 6 | 17 | 12 | Sy5y_exp1_D2 | 16 | 12 | 22 | 17 | occipital_lobe | 100 | 55 | 122 | 82 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||