| ID | hsa_circ_0001073 | |||||
| Alias | hsa_circ_000913 | |||||
| Position | chr2:148653869-148657467 | |||||
| Strand | + | |||||
| Genomic length | 3598 | |||||
| Spliced sequence length | 473 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001616 | |||||
| Gene symbol | ACVR2A | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | cd_19 | 1 | 1 | 0 | 2 | cd_34 | 1 | 1 | 0 | 0 | HEK293 | 1 | 1 | 0 | 2 |
| Salzman2013 | Gm12878 | 30 | 15 | 0 | 7 | Ag04450 | 83 | 36 | 14 | 36 | A549 | 31 | 20 | 10 | 28 | Sknshra | 44 | 23 | 9 | 47 | Huvec | 2 | 1 | 3 | 24 | Hepg2 | 99 | 31 | 7 | 39 | Nhek | 34 | 7 | 2 | 15 | K562 | 36 | 27 | 2 | 10 | Helas3 | 141 | 61 | 15 | 58 | Bj | 47 | 24 | 8 | 31 | H1hesc | 81 | 31 | 6 | 39 |
| Rybak2015 | Sy5y_exp1_D0 | 4 | 4 | 9 | 4 | SY5Y_exp2_D4 | 2 | 2 | 4 | 0 | Sy5y_exp1_D2 | 13 | 11 | 3 | 8 | parietal_lobe | 434 | 152 | 29 | 42 | temporal_lobe | 231 | 75 | 19 | 39 | SY5Y_exp2_D8 | 2 | 2 | 2 | 3 | cerebellum | 401 | 193 | 34 | 44 | occipital_lobe | 1564 | 315 | 60 | 54 | diencephalon | 717 | 248 | 41 | 47 | frontal_cortex | 2392 | 339 | 70 | 63 |
| Jeck2013 | Hs68_control | 12 | 9 | 15 | 13 | Hs68_RNase | 363 | 127 | 1 | 0 |
| Maass2017 | adipose | 2 | 2 | 2 | 2 | osteocytes | 3 | 3 | 0 | 0 | MSC_047 | 2 | 2 | 8 | 7 | platelets | 77 | 32 | 0 | 0 | decidua | 2 | 2 | 2 | 0 | vena_cava | 8 | 6 | 2 | 0 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||