| ID | hsa_circ_0001072 | |||||
| Alias | hsa_circ_001919 | |||||
| Position | chr2:144966169-144969146 | |||||
| Strand | - | |||||
| Genomic length | 2977 | |||||
| Spliced sequence length | 267 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_024659 | |||||
| Gene symbol | GTDC1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 87 | 51 | 19 | 12 | Hs68_control | 6 | 5 | 8 | 28 |
| Rybak2015 | parietal_lobe | 156 | 68 | 65 | 95 | occipital_lobe | 283 | 84 | 85 | 108 | diencephalon | 31 | 27 | 33 | 60 | Sy5y_exp1_D0 | 6 | 6 | 0 | 3 | Sy5y_exp1_D2 | 4 | 4 | 0 | 6 | temporal_lobe | 158 | 45 | 64 | 49 | frontal_cortex | 324 | 84 | 92 | 92 | cerebellum | 59 | 50 | 28 | 79 | Sy5y_exp1_D4 | 2 | 2 | 0 | 4 |
| Maass2017 | fibroblasts | 2 | 2 | 0 | 3 | platelets | 37 | 25 | 14 | 9 |
| Salzman2013 | Bj | 16 | 8 | 14 | 16 | Huvec | 3 | 2 | 12 | 21 | H1hesc | 22 | 12 | 22 | 30 | Sknshra | 3 | 2 | 17 | 12 | Helas3 | 24 | 12 | 6 | 6 | Gm12878 | 65 | 40 | 36 | 19 | K562 | 29 | 26 | 43 | 10 | Ag04450 | 2 | 2 | 31 | 12 | A549 | 10 | 7 | 22 | 12 | Nhek | 20 | 5 | 8 | 13 | Hepg2 | 15 | 13 | 0 | 3 |
| Memczak2013 | cd_19 | 8 | 1 | 4 | 41 | cd_34 | 9 | 3 | 0 | 2 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||