| ID | hsa_circ_0001016 | |||||
| Alias | hsa_circ_001767 | |||||
| Position | chr2:61749745-61753656 | |||||
| Strand | - | |||||
| Genomic length | 3911 | |||||
| Spliced sequence length | 175 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_003400 | |||||
| Gene symbol | XPO1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | ada_scid | 12 | 11 | 27 | 9 | adipose | 3 | 3 | 10 | 5 | LCL | 9 | 8 | 26 | 16 | vena_cava | 4 | 4 | 13 | 5 | WAS2 | 21 | 9 | 34 | 18 | HUAEC | 3 | 2 | 18 | 9 | decidua | 2 | 2 | 11 | 4 | platelets | 41 | 16 | 42 | 11 | EPC | 4 | 3 | 14 | 7 |
| Salzman2013 | Ag04450 | 36 | 23 | 118 | 40 | Nhek | 9 | 4 | 108 | 41 | Gm12878 | 33 | 25 | 117 | 50 | Helas3 | 7 | 5 | 60 | 18 | Sknshra | 21 | 13 | 76 | 43 | Hepg2 | 9 | 4 | 59 | 5 | A549 | 9 | 5 | 83 | 38 | Bj | 21 | 11 | 41 | 8 | K562 | 193 | 116 | 504 | 314 |
| Jeck2013 | Hs68_control | 23 | 16 | 138 | 74 | Hs68_RNase | 431 | 121 | 129 | 1 |
| Memczak2013 | HEK293 | 1 | 1 | 15 | 10 | cd_19 | 3 | 1 | 24 | 19 | neutr | 8 | 2 | 4 | 5 |
| Rybak2015 | SY5Y_exp2_D4 | 6 | 5 | 40 | 24 | Sy5y_exp1_D2 | 27 | 23 | 39 | 32 | parietal_lobe | 422 | 127 | 278 | 122 | Sy5y_exp1_D0 | 18 | 10 | 76 | 20 | SY5Y_exp2_D8 | 10 | 8 | 41 | 18 | diencephalon | 447 | 172 | 262 | 156 | frontal_cortex | 1717 | 263 | 392 | 149 | cerebellum | 429 | 169 | 308 | 186 | SY5Y_exp2_D0 | 5 | 4 | 52 | 19 | temporal_lobe | 683 | 140 | 296 | 126 | occipital_lobe | 1191 | 229 | 344 | 140 | Sy5y_exp1_D4 | 20 | 12 | 56 | 23 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||