| ID | hsa_circ_0000944 | |||||
| Alias | hsa_circ_000285 | |||||
| Position | chr19:47767859-47768203 | |||||
| Strand | + | |||||
| Genomic length | 344 | |||||
| Spliced sequence length | 258 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_015603 | |||||
| Gene symbol | CCDC9 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | HUAEC | 3 | 3 | 2 | 3 | vena_cava | 6 | 6 | 0 | 0 | adipose | 3 | 3 | 0 | 0 | WAS2 | 2 | 2 | 4 | 2 | right_atrium | 2 | 2 | 4 | 0 | neutophils | 3 | 3 | 2 | 2 |
| Memczak2013 | cd_34 | 7 | 3 | 0 | 0 | neutr |
| Rybak2015 | diencephalon | 38 | 31 | 17 | 2 | frontal_cortex | 148 | 75 | 5 | 6 | Sy5y_exp1_D2 | 2 | 2 | 8 | 5 | temporal_lobe | 64 | 29 | 11 | 4 | cerebellum | 29 | 26 | 13 | 5 | Sy5y_exp1_D0 | 5 | 5 | 8 | 4 | parietal_lobe | 30 | 22 | 9 | 5 | occipital_lobe | 91 | 47 | 8 | 4 | SY5Y_exp2_D8 | 2 | 2 | 5 | 4 | SY5Y_exp2_D4 | 2 | 2 | 6 | 0 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||