| ID | hsa_circ_0000921 | |||||
| Alias | hsa_circ_001099 | |||||
| Position | chr19:30476129-30477324 | |||||
| Strand | + | |||||
| Genomic length | 1195 | |||||
| Spliced sequence length | 215 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_134447 | |||||
| Gene symbol | C19orf2 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Sknshra | 83 | 34 | 22 | 6 | Helas3 | 45 | 20 | 4 | 5 | Mcf7 | 34 | 11 | 1 | 0 | Hsmm | H1hesc | 37 | 23 | 18 | 9 | Ag04450 | 82 | 54 | 17 | 12 | Nhek | 64 | 21 | 12 | 12 | Gm12878 | 69 | 40 | 15 | 15 | Huvec | Bj | 52 | 28 | 14 | 6 | Hepg2 | 36 | 14 | 17 | 6 | K562 | 310 | 186 | 75 | 70 | Hmec | 85 | 4 | 0 | 0 | A549 | 123 | 53 | 27 | 20 |
| Rybak2015 | Sy5y_exp1_D2 | 11 | 11 | 8 | 29 | parietal_lobe | 77 | 47 | 22 | 83 | temporal_lobe | 51 | 18 | 8 | 86 | Sy5y_exp1_D4 | 8 | 7 | 8 | 29 | frontal_cortex | 212 | 79 | 31 | 125 | diencephalon | 56 | 47 | 29 | 104 | Sy5y_exp1_D0 | 22 | 16 | 7 | 41 | occipital_lobe | 106 | 54 | 26 | 92 | cerebellum | 41 | 31 | 35 | 97 | SY5Y_exp2_D0 | 6 | 6 | 9 | 31 | SY5Y_exp2_D8 | 3 | 2 | 5 | 22 |
| Jeck2013 | Hs68_control | 13 | 10 | 33 | 57 | Hs68_RNase | 426 | 114 | 27 | 0 |
| Memczak2013 | cd_19 | 2 | 2 | 7 | 5 | HEK293 | 2 | 2 | 4 | 3 |
| Maass2017 | platelets | 13 | 11 | 0 | 0 | adipose | 4 | 4 | 4 | 0 | vena_cava | 4 | 4 | 0 | 0 | WAS2 | 2 | 2 | 2 | 22 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||