| ID | hsa_circ_0000854 | |||||
| Alias | hsa_circ_001094 | |||||
| Position | chr18:60206913-60217693 | |||||
| Strand | + | |||||
| Genomic length | 10780 | |||||
| Spliced sequence length | 374 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_017742 | |||||
| Gene symbol | ZCCHC2 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | frontal_cortex | 9 | 4 | 16 | 44 | parietal_lobe | 5 | 4 | 22 | 39 | occipital_lobe | 14 | 10 | 12 | 40 | cerebellum | 11 | 9 | 23 | 38 | diencephalon | 9 | 6 | 27 | 49 | Sy5y_exp1_D0 | 4 | 3 | 7 | 3 | temporal_lobe | 3 | 2 | 5 | 20 |
| Salzman2013 | Mcf7 | 1 | 1 | 0 | 1 | Hepg2 | 37 | 10 | 21 | 9 | Huvec | 2 | 1 | 5 | 3 | Sknshra | 3 | 2 | 6 | 5 | A549 | 14 | 8 | 12 | 6 | Nhek | 21 | 7 | 4 | 9 | Ag04450 | 14 | 8 | 4 | 6 | H1hesc | 5 | 3 | 8 | 13 | K562 | 18 | 15 | 12 | 23 | Helas3 | 26 | 16 | 26 | 13 |
| Maass2017 | WAS2 | 4 | 4 | 8 | 9 | platelets | 11 | 8 | 0 | 0 |
| Memczak2013 | neutr | 4 | 2 | 4 | 1 | |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||