| ID | hsa_circ_0000825 | |||||
| Alias | hsa_circ_001494 | |||||
| Position | chr18:8718421-8720494 | |||||
| Strand | + | |||||
| Genomic length | 2073 | |||||
| Spliced sequence length | 384 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_015210 | |||||
| Gene symbol | CCDC165 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | A549 | 39 | 24 | 60 | 4 | Ag04450 | 96 | 52 | 91 | 27 | K562 | 14 | 11 | 18 | 31 | H1hesc | 2 | 1 | 0 | 3 | Bj | 30 | 12 | 41 | 1 |
| Maass2017 | EPC | 4 | 3 | 2 | 6 | VSMC | 2 | 2 | 0 | 5 | HUAEC | 5 | 5 | 5 | 11 | fibroblasts | 3 | 2 | 10 | 12 |
| Rybak2015 | occipital_lobe | 59 | 36 | 47 | 23 | diencephalon | 47 | 34 | 20 | 19 | parietal_lobe | 25 | 19 | 39 | 43 | SY5Y_exp2_D4 | 2 | 2 | 12 | 13 | Sy5y_exp1_D0 | 5 | 5 | 14 | 8 | frontal_cortex | 84 | 45 | 35 | 23 | temporal_lobe | 36 | 14 | 19 | 11 | Sy5y_exp1_D2 | 3 | 3 | 2 | 6 | SY5Y_exp2_D8 | 3 | 2 | 10 | 15 | cerebellum | 22 | 18 | 34 | 20 |
| Jeck2013 | Hs68_control | 11 | 8 | 16 | 16 | Hs68_RNase | 245 | 102 | 14 | 22 |
| Memczak2013 | cd_34 | 7 | 2 | 0 | 0 | |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||