circBase

ID	hsa_circ_0000816
Alias	hsa_circ_001758
Position	chr17:80521229-80526077
Strand	+
Genomic length	4848
Spliced sequence length	343
Annotation	ANNOTATED CDS coding INTERNAL OVCODE OVEXON
Repeats	None
Best transcript	NM_004514
Gene symbol	FOXK2
Scores	circRNA study	Sample	total reads circular junction	unique reads circular junction	unique reads linear-5' junctions	unique reads linear-3' junctions
	Maass2017	chondrocytes	4	4	2	5
		adipose	2	2	4	4
		WAS2	3	3	8	14
		right_atrium	2	2	5	5
	Jeck2013	Hs68_RNase	487	158	5	67
	Jeck2013	Hs68_control	17	12	30	41
	Salzman2013	Nhek	98	40	78	82
		Hepg2	98	44	93	83
		Helas3	69	46	117	87
		Gm12878	167	77	57	54
		A549	97	47	47	68
		Ag04450	43	28	30	55
		Nhlf	45	9	4	17
		Huvec	20	7	39	67
		Bj	41	22	36	29
		Sknshra	66	38	55	62
		Hsmm	48	8	9	20
		H1hesc	51	27	65	65
		K562	127	87	55	107
		Mcf7	88	21	5	69
	Memczak2013	cd_34	5	3	3	1
		cd_19	1	1	10	2
		HEK293	3	3	2	1
	Rybak2015	SY5Y_exp2_D0	7	6	20	26
		frontal_cortex	202	76	76	106
		Sy5y_exp1_D2	16	12	27	37
		Sy5y_exp1_D0	12	12	38	36
		diencephalon	140	97	66	103
		temporal_lobe	79	38	28	63
		SY5Y_exp2_D4	2	2	18	25
		Sy5y_exp1_D4	8	8	17	42
		cerebellum	79	62	53	75
		parietal_lobe	66	41	65	100
		occipital_lobe	84	54	54	71
Aligned reads	Memczak 2013 circRNA study (pooled samples)