| ID | hsa_circ_0000798 | |||||
| Alias | hsa_circ_001489 | |||||
| Position | chr17:65941524-65944422 | |||||
| Strand | + | |||||
| Genomic length | 2898 | |||||
| Spliced sequence length | 1226 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_182641 | |||||
| Gene symbol | BPTF | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | frontal_cortex | 6 | 4 | 11 | 5 | Sy5y_exp1_D4 | 3 | 3 | 21 | 16 | SY5Y_exp2_D0 | 3 | 3 | 25 | 26 | Sy5y_exp1_D0 | 3 | 3 | 19 | 20 | Sy5y_exp1_D2 | 2 | 2 | 18 | 12 | SY5Y_exp2_D8 | 3 | 3 | 19 | 15 | diencephalon | 4 | 4 | 7 | 22 |
| Memczak2013 | HEK293 | 1 | 1 | 1 | 3 | neutr | 2 | 2 | 0 | 0 | cd_19 | 2 | 1 | 3 | 0 |
| Maass2017 | neutophils | 3 | 3 | 0 | 5 | platelets | 6 | 6 | 0 | 3 |
| Salzman2013 | A549 | 26 | 12 | 35 | 25 | Ag04450 | 25 | 10 | 15 | 31 | Sknshra | 13 | 7 | 35 | 31 | Bj | 12 | 7 | 7 | 23 | K562 | 5 | 4 | 40 | 18 | Helas3 | 25 | 12 | 52 | 9 | Gm12878 | 10 | 6 | 44 | 11 | Hepg2 | 12 | 4 | 42 | 15 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||