| ID | hsa_circ_0000732 | |||||
| Alias | hsa_circ_000220 | |||||
| Position | chr17:1540002-1540356 | |||||
| Strand | - | |||||
| Genomic length | 354 | |||||
| Spliced sequence length | 269 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_003693 | |||||
| Gene symbol | SCARF1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Hepg2 | 3 | 1 | 2 | 0 | K562 | 8 | 8 | 0 | 0 | Ag04450 | 3 | 1 | 0 | 0 | Gm12878 | 7 | 3 | 1 | 0 | Helas3 | 25 | 7 | 2 | 0 | Huvec | 73 | 28 | 50 | 39 |
| Rybak2015 | occipital_lobe | 22 | 9 | 6 | 11 | parietal_lobe | 2 | 2 | 3 | 4 | diencephalon | 13 | 12 | 8 | 8 | cerebellum | 9 | 7 | 8 | 7 | frontal_cortex | 26 | 13 | 8 | 8 |
| Maass2017 | platelets | 7 | 7 | 0 | 0 | |
| Memczak2013 | cd_34 | 14 | 3 | 0 | 0 | neutr | 6 | 2 | 1 | 0 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||