| ID | hsa_circ_0000688 | |||||
| Alias | hsa_circ_000014 | |||||
| Position | chr16:29845053-29845387 | |||||
| Strand | + | |||||
| Genomic length | 334 | |||||
| Spliced sequence length | 256 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_005115 | |||||
| Gene symbol | MVP | |||||
| Experimental exidence | ||||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | muscle | 4 | 4 | 2 | 6 | |
| Rybak2015 | diencephalon | 5 | 3 | 14 | 12 | occipital_lobe | 2 | 2 | 3 | 5 | cerebellum | 2 | 2 | 21 | 26 | frontal_cortex | 12 | 5 | 14 | 14 | parietal_lobe | 3 | 3 | 11 | 12 |
| Salzman2013 | Nhek | 33 | 12 | 254 | 240 | H1hesc | 1 | 1 | 3 | 6 | Huvec | 3 | 1 | 57 | 84 | Nhlf | 15 | 2 | 153 | 258 | Gm12878 | 22 | 13 | 127 | 95 | Ag04450 | 35 | 19 | 206 | 236 | Bj | 54 | 23 | 191 | 123 | Hepg2 | 17 | 5 | 87 | 53 | Sknshra | 50 | 22 | 206 | 186 | A549 | 5 | 2 | 120 | 100 | Helas3 | 13 | 3 | 69 | 57 | Hsmm | Mcf7 | 2 | 1 | 9 | 20 |
| Memczak2013 | HEK293 | 1 | 1 | 0 | 0 | cd_19 | 2 | 2 | 1 | 0 |
| Jeck2013 | Hs68_control | 5 | 4 | 151 | 139 | Hs68_RNase | 276 | 119 | 138 | 72 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||