| ID | hsa_circ_0000679 | |||||
| Alias | hsa_circ_001257 | |||||
| Position | chr16:16218645-16219768 | |||||
| Strand | + | |||||
| Genomic length | 1123 | |||||
| Spliced sequence length | 229 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_019899 | |||||
| Gene symbol | ABCC1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 199 | 96 | 46 | 46 | Hs68_control | 8 | 7 | 48 | 49 |
| Rybak2015 | diencephalon | 18 | 16 | 12 | 26 | Sy5y_exp1_D0 | 2 | 2 | 4 | 24 | occipital_lobe | 49 | 34 | 8 | 22 | cerebellum | 5 | 5 | 11 | 15 | parietal_lobe | 45 | 33 | 8 | 23 | temporal_lobe | 22 | 13 | 15 | 8 | frontal_cortex | 61 | 28 | 13 | 27 |
| Memczak2013 | cd_19 | 5 | 2 | 4 | 0 | |
| Salzman2013 | K562 | 36 | 24 | 28 | 19 | Hepg2 | 43 | 16 | 89 | 51 | H1hesc | 16 | 12 | 113 | 41 | Bj | 140 | 55 | 54 | 37 | Gm12878 | 43 | 20 | 58 | 28 | Helas3 | 28 | 17 | 85 | 23 | Sknshra | 38 | 15 | 68 | 47 | Ag04450 | 113 | 50 | 151 | 91 | Huvec | 56 | 14 | 71 | 38 | Nhek | 51 | 13 | 80 | 49 | A549 | 22 | 13 | 142 | 99 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples)![]() | |||||
