| ID | hsa_circ_0000651 | |||||
| Alias | hsa_circ_001789 | |||||
| Position | chr15:90982563-90986710 | |||||
| Strand | + | |||||
| Genomic length | 4147 | |||||
| Spliced sequence length | 446 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_003870 | |||||
| Gene symbol | IQGAP1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | Sy5y_exp1_D0 | 2 | 2 | 19 | 21 | occipital_lobe | 132 | 63 | 64 | 38 | temporal_lobe | 111 | 44 | 28 | 25 | frontal_cortex | 156 | 80 | 51 | 27 | diencephalon | 37 | 33 | 35 | 33 | cerebellum | 23 | 21 | 46 | 41 | parietal_lobe | 37 | 28 | 46 | 50 |
| Salzman2013 | Ag04450 | 3 | 3 | 229 | 134 | Sknshra | A549 | 3 | 3 | 160 | 85 | K562 | 7 | 7 | 366 | 212 | Helas3 | H1hesc | 2 | 1 | 264 | 108 | Gm12878 | 20 | 11 | 242 | 100 |
| Memczak2013 | neutr | 7 | 3 | 23 | 17 | cd_19 | 6 | 2 | 25 | 18 |
| Jeck2013 | Hs68_control | 7 | 5 | 29 | 36 | Hs68_RNase | 135 | 63 | 0 | 12 |
| Maass2017 | WAS2 | 2 | 2 | 20 | 27 | EPC | 2 | 2 | 20 | 18 | neutophils | 2 | 2 | 21 | 23 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||