| ID | hsa_circ_0000650 | |||||
| Alias | hsa_circ_001909 | |||||
| Position | chr15:90760670-90764997 | |||||
| Strand | + | |||||
| Genomic length | 4327 | |||||
| Spliced sequence length | 704 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_020210 | |||||
| Gene symbol | SEMA4B | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 52 | 41 | 5 | 6 | Hs68_control | 3 | 2 | 3 | 15 |
| Rybak2015 | temporal_lobe | 55 | 18 | 12 | 13 | frontal_cortex | 132 | 51 | 34 | 28 | parietal_lobe | 36 | 24 | 61 | 31 | cerebellum | 13 | 10 | 31 | 14 | diencephalon | 51 | 42 | 35 | 19 | occipital_lobe | 62 | 31 | 31 | 37 |
| Memczak2013 | cd_19 | 17 | 6 | 1 | 3 | |
| Salzman2013 | A549 | 50 | 27 | 40 | 55 | H1hesc | 15 | 5 | 31 | 42 | Hepg2 | 23 | 7 | 36 | 42 | K562 | 16 | 12 | 16 | 24 | Sknshra | 22 | 9 | 35 | 74 | Mcf7 | 20 | 6 | 29 | 28 | Gm12878 | 12 | 4 | 10 | 20 | Nhlf | Helas3 | 22 | 9 | 65 | 75 | Ag04450 | 18 | 12 | 17 | 17 | Nhek | 32 | 11 | 76 | 127 | Bj | 10 | 6 | 2 | 12 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||