| ID | hsa_circ_0000643 | |||||
| Alias | hsa_circ_001681 | |||||
| Position | chr15:80412669-80415142 | |||||
| Strand | + | |||||
| Genomic length | 2473 | |||||
| Spliced sequence length | 381 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001242916 | |||||
| Gene symbol | ZFAND6 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | cd_19 | neutr | 10 | 3 | 3 | 0 |
| Maass2017 | neutophils | 4 | 4 | 0 | 6 | platelets | 39 | 17 | 27 | 17 |
| Rybak2015 | cerebellum | 181 | 112 | 146 | 119 | parietal_lobe | 60 | 47 | 79 | 60 | occipital_lobe | 149 | 75 | 125 | 97 | frontal_cortex | 217 | 104 | 154 | 96 | Sy5y_exp1_D2 | 3 | 3 | 28 | 24 | temporal_lobe | 41 | 23 | 66 | 41 | diencephalon | 110 | 76 | 124 | 89 |
| Salzman2013 | Huvec | H1hesc | 194 | 65 | 76 | 105 | Ag04450 | 53 | 36 | 19 | 45 | Hepg2 | 82 | 25 | 18 | 40 | A549 | 58 | 32 | 36 | 46 | Bj | 28 | 19 | 22 | 25 | K562 | 146 | 95 | 77 | 90 | Helas3 | 95 | 42 | 11 | 35 | Sknshra | 15 | 9 | 15 | 35 | Nhek | 51 | 17 | 21 | 36 | Hsmm | Mcf7 | Gm12878 | 178 | 87 | 44 | 54 |
| Jeck2013 | Hs68_RNase | 190 | 86 | 57 | 6 | Hs68_control |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||