| ID | hsa_circ_0000642 | |||||
| Alias | hsa_circ_002031 | |||||
| Position | chr15:80390757-80415142 | |||||
| Strand | + | |||||
| Genomic length | 24385 | |||||
| Spliced sequence length | 544 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001242916 | |||||
| Gene symbol | ZFAND6 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 71 | 46 | 0 | 6 | Hs68_control | 4 | 4 | 1 | 40 |
| Salzman2013 | Sknshra | 3 | 2 | 1 | 35 | Bj | K562 | 32 | 27 | 9 | 90 | Hepg2 | 3 | 2 | 0 | 40 | Nhek | 5 | 3 | 6 | 36 | A549 | Ag04450 | 2 | 2 | 2 | 45 | H1hesc | 29 | 13 | 6 | 105 | Helas3 | 1 | 1 | 0 | 35 | Gm12878 | 36 | 16 | 1 | 54 |
| Rybak2015 | temporal_lobe | 24 | 12 | 27 | 41 | Sy5y_exp1_D0 | 2 | 2 | 2 | 25 | frontal_cortex | 116 | 67 | 67 | 96 | diencephalon | 33 | 29 | 73 | 89 | Sy5y_exp1_D4 | 3 | 3 | 0 | 34 | Sy5y_exp1_D2 | 6 | 6 | 4 | 24 | cerebellum | 56 | 42 | 58 | 119 | occipital_lobe | 53 | 35 | 41 | 97 | parietal_lobe | 31 | 22 | 30 | 60 |
| Memczak2013 | cd_34 | 24 | 4 | 0 | 0 | |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||