| ID | hsa_circ_0000592 | |||||
| Alias | hsa_circ_001251 | |||||
| Position | chr15:41988272-41991357 | |||||
| Strand | + | |||||
| Genomic length | 3085 | |||||
| Spliced sequence length | 1124 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001164273 | |||||
| Gene symbol | MGA | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | occipital_lobe | 200 | 84 | 120 | 73 | diencephalon | 142 | 94 | 107 | 76 | Sy5y_exp1_D0 | 14 | 11 | 27 | 20 | Sy5y_exp1_D2 | 15 | 11 | 21 | 20 | cerebellum | 113 | 89 | 174 | 94 | Sy5y_exp1_D4 | 4 | 4 | 20 | 15 | SY5Y_exp2_D8 | 4 | 4 | 26 | 13 | parietal_lobe | 105 | 65 | 158 | 66 | temporal_lobe | 150 | 57 | 102 | 46 | frontal_cortex | 279 | 97 | 131 | 80 |
| Maass2017 | placenta | 2 | 2 | 4 | 2 | vena_cava | 4 | 4 | 9 | 4 | WAS2 | 3 | 2 | 8 | 12 | cortex | 3 | 2 | 2 | 2 |
| Memczak2013 | cd_19 | 5 | 5 | 10 | 2 | |
| Jeck2013 | Hs68_control | 11 | 8 | 20 | 26 | Hs68_RNase | 57 | 37 | 1 | 6 |
| Salzman2013 | Hepg2 | 21 | 11 | 48 | 24 | Helas3 | 37 | 24 | 46 | 28 | A549 | 8 | 6 | 42 | 13 | K562 | 75 | 54 | 202 | 84 | Ag04450 | 25 | 19 | 58 | 18 | Sknshra | 15 | 9 | 70 | 24 | H1hesc | 29 | 11 | 79 | 28 | Gm12878 | 20 | 11 | 63 | 21 | Nhek | 8 | 2 | 45 | 14 | Bj | 2 | 2 | 23 | 6 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||