| ID | hsa_circ_0000586 | |||||
| Alias | hsa_circ_001847 | |||||
| Position | chr15:25650607-25657118 | |||||
| Strand | - | |||||
| Genomic length | 6511 | |||||
| Spliced sequence length | 291 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_000462 | |||||
| Gene symbol | UBE3A | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | neutr | 2 | 1 | 0 | 2 | HEK293 | cd_19 |
| Rybak2015 | cerebellum | 51 | 26 | 75 | 107 | temporal_lobe | 41 | 18 | 58 | 74 | SY5Y_exp2_D0 | 3 | 3 | 6 | 12 | frontal_cortex | 182 | 41 | 149 | 129 | occipital_lobe | 106 | 31 | 88 | 121 | SY5Y_exp2_D4 | 2 | 2 | 3 | 15 | parietal_lobe | 63 | 31 | 85 | 109 | Sy5y_exp1_D0 | 4 | 3 | 3 | 10 | Sy5y_exp1_D4 | 7 | 5 | 4 | 23 | diencephalon | 48 | 28 | 92 | 100 |
| Salzman2013 | K562 | 66 | 48 | 41 | 157 | Sknshra | 14 | 12 | 5 | 72 | Helas3 | 24 | 15 | 7 | 77 | H1hesc | 37 | 23 | 21 | 120 | A549 | 5 | 4 | 15 | 61 | Hepg2 | 15 | 12 | 4 | 101 | Huvec | 6 | 4 | 11 | 33 | Bj | 15 | 9 | 6 | 63 | Nhek | 38 | 15 | 17 | 73 | Gm12878 | 28 | 22 | 24 | 114 | Ag04450 | 21 | 17 | 12 | 86 |
| Maass2017 | vena_cava | 3 | 3 | 0 | 2 | |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||